RNAJunction Database - Junction Profile:6180
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6180: 1VOW_j2_B-G600_B-U674

Primary Citation: (from PDB entry 1VOW)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VOR j2 B-G600 B-U674 
NC-IUBMB Classification:HS4HS5Cluster Page
Angles: 178°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.74405Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: UAGACCUGACG 11nt

Strand 2: Chain B: CGUCGGGCUA 10nt

Valid XHTML 1.0 Transitional