RNAJunction Database - Junction Profile:6128
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 6128: 1VOV_j2_A-U249_A-C272

Primary Citation: (from PDB entry 1VOV)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1VOS j2 A-U249 A-C272 
NC-IUBMB Classification:HS2HS4Cluster Page
Angles: 107°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.61543Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCUAGUUGGU 10nt

Strand 2: Chain A: ACCAAGGC 8nt

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