RNAJunction Database - Junction Profile:5924
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5924: 1VOQ_j5_A-C36_A-C403_A-C436_A-U495_A-C545

Primary Citation: (from PDB entry 1VOQ)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:2F4V j5 A-C36 A-C403 A-C436 A-U495 A-C545 
NC-IUBMB Classification:Cluster Page
Angles: 14:50:54:83:90:91:99:114:131:140°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.5128Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCUUGG 6nt

Strand 2: Chain A: GCUGGC 6nt

Strand 3: Chain A: CCUGAA 6nt

Strand 4: Chain A: GUAAUAGC 8nt

Strand 5: Chain A: GCGAGC 6nt

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