RNAJunction Database - Junction Profile:5906
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5906: 1VOQ_j2_A-U133_A-U223

Primary Citation: (from PDB entry 1VOQ)

A.VILA-SANJURJO B.S.SCHUWIRTH C.W.HAU J.H.CATE STRUCTURAL BASIS FOR THE CONTROL OF TRANSLATION INITIATION DURING STRESS. NAT.STRUCT.MOL.BIOL. V. 11 1054 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1VOV j2 A-U133 A-U223 
NC-IUBMB Classification:HS5HS6Cluster Page
Angles: 167°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 2.00263Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCUACCCGGAAG 12nt

Strand 2: Chain A: CUUCCGGAUGG 11nt

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