RNAJunction Database - Junction Profile:5828
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5828: 1SM1_j2_0-U857_0-C939

Primary Citation: (from PDB entry 1SM1)

J.M.HARMS F.SCHLUENZEN P.FUCINI H.BARTELS A.YONATH ALTERATIONS AT THE PEPTIDYL TRANSFERASE CENTRE OF THE RIBOSOME INDUCED BY THE SYNERGISTIC ACTION OF THE STREPTOGRAMINS DALFOPRISTIN AND QUINUPRISTIN. BMC BIOL. V. 2 4 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1XBP j2 0-U857 0-C939 
NC-IUBMB Classification:HS5HS5Cluster Page
Angles: 68°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.92987Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GAUGUUGACCA 11nt

Strand 2: Chain 0: CGCGUUUAGUC 11nt

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