RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5669: 1S1I_j5_3-A2095_3-G2481_3-U2531_3-U2615_3-C2641

Primary Citation: (from PDB entry 1S1I)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images

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Derived Information

Type:	5-way	Cluster:	1Q82 j5 A-A2095 A-G2481 A-U2531 A-U2615 A-C2641
NC-IUBMB Classification:			Cluster Page
Angles:	19:26:30:47:108:126:131:150:155:172°
Fit Criteria:	B
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 1.09397Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 3: AGGGAUAACAGAGU 14nt

Strand 2: Chain 3: GGAAGCGAAGACCCU 15nt

Strand 3: Chain 3: GCUACCUCGAUGUCGGU 17nt

Strand 4: Chain 3: GCUGGGUUUAGAC 13nt

Strand 5: Chain 3: GUCGGCUGCUAUCU 14nt