RNAJunction Database - Junction Profile:5635
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5635: 1S1I_j2_3-U548_3-A602

Primary Citation: (from PDB entry 1S1I)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1M1K j2 A-U548 A-A602 
NC-IUBMB Classification:HS5HS6Cluster Page
Angles: 47°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.51315Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 3: CAUACAAGGUCC 12nt

Strand 2: Chain 3: GGAAGCCGAUG 11nt

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