RNAJunction Database - Junction Profile:5576
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5576: 1S1I_j2_3-C1854_3-U1871

Primary Citation: (from PDB entry 1S1I)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1VQL j2 0-C1854 0-U1871 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 70°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.85007Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 3: ACUCGUACGGU 11nt

Strand 2: Chain 3: ACCGCAAAU 9nt

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