RNAJunction Database - Junction Profile:5527
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5527: 1S1H_j2_A-G774_A-U804

Primary Citation: (from PDB entry 1S1H)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1HNW j2 A-G774 A-U804 
NC-IUBMB Classification:2HS3Cluster Page
Angles: 87°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.68296Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGGGGAGCA 9nt

Strand 2: Chain A: AGUCCA 6nt

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