RNAJunction Database - Junction Profile:5506
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5506: 1S1H_j2_A-C242_A-G278

Primary Citation: (from PDB entry 1S1H)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1FJG j2 A-C242 A-G278 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 60°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.82377Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGACGACGGG 11nt

Strand 2: Chain A: CCCAUCAGC 9nt

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