RNAJunction Database - Junction Profile:5471
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5471: 1R3E_j2_D-G408_E-C415

Primary Citation: (from PDB entry 1R3E)

H.PAN S.AGARWALLA D.T.MOUSTAKAS J.FINER-MOORE R.M.STROUD CRYSTAL STRUCTURE OF TRNA PSEUDOURIDINE SYNTHASE TRUB AND ITS RNA COMPLEX: RNA RECOGNITION THROUGH A COMBINATION OF RIGID DOCKING AND INDUCED FIT PROC.NAT.ACAD.SCI.USA V. 100 12648 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1R3E j2 D-C415 E-G408 
NC-IUBMB Classification:2HS3Cluster Page
Angles: 163°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.1805Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain D: GUGUUCGAU 9nt

Strand 2: Chain E: AUCCAC 6nt

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