RNAJunction Database - Junction Profile:545

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 545: 1GRZ_j2_B-A114_B-U205

Primary Citation: (from PDB entry 1GRZ)

B.L.GOLDEN A.R.GOODING E.R.PODELL T.R.CECH A PREORGANIZED ACTIVE SITE IN THE CRYSTAL STRUCTURE OF THE TETRAHYMENA RIBOZYME SCIENCE V. 282 259 1998

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1HR2 j2 A-A114 A-U205 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 171°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.70844Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GAAAGGG 7nt

Strand 2: Chain B: CCUAAC 6nt

Valid XHTML 1.0 Transitional