RNAJunction Database - Junction Profile:5334
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5334: 1QVF_j5_0-A2095_0-G2481_0-U2531_0-U2615_0-C2641

Primary Citation: (from PDB entry 1QVF)

T.M.SCHMEING P.B.MOORE T.A.STEITZ STRUCTURES OF DEACYLATED TRNA MIMICS BOUND TO THE E SITE OF THE LARGE RIBOSOMAL SUBUNIT RNA V. 9 1345 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1Q82 j5 A-A2095 A-G2481 A-U2531 A-U2615 A-C2641 
NC-IUBMB Classification:Cluster Page
Angles: 18:25:28:46:110:127:132:151:156:172°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.77668Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AGGGAUAACAGAGU 14nt

Strand 2: Chain 0: GGAAGCGAAGACCCU 15nt

Strand 3: Chain 0: GCUACCUCGAUGUCGGU 17nt

Strand 4: Chain 0: GCUGGGUUUAGAC 13nt

Strand 5: Chain 0: GUCGGCUGCUAUCU 14nt

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