RNAJunction Database - Junction Profile:4668
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4668: 1PNY_j2_0-C391_0-A407

Primary Citation: (from PDB entry 1PNY)

A.VILA-SANJURJO W.K.RIDGEWAY V.SEYMANER W.ZHANG S.SANTOSO K.YU J.H.D.CATE X-RAY CRYSTAL STRUCTURES OF THE WT AND A HYPER-ACCURATE RIBOSOME FROM ESCHERICHIA COLI PROC.NAT.ACAD.SCI.USA V. 100 8682 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1J5A j2 A-C391 A-A407 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 155°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.9289Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GUCGUUG 7nt

Strand 2: Chain 0: CGAUGAC 7nt

Valid XHTML 1.0 Transitional