RNAJunction Database - Junction Profile:4632

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4632: 1PNX_j4_A-A143_A-C178_A-C194_A-C219

Primary Citation: (from PDB entry 1PNX)

A.VILA-SANJURJO W.K.RIDGEWAY V.SEYMANER W.ZHANG S.SANTOSO K.YU J.H.D.CATE X-RAY CRYSTAL STRUCTURES OF THE WT AND A HYPER-ACCURATE RIBOSOME FROM ESCHERICHIA COLI PROC.NAT.ACAD.SCI.USA V. 100 8682 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1I95 j4 A-A137 A-C172 A-C200 A-C214 
NC-IUBMB Classification:Cluster Page
Angles: 27:30:120:147:148:173°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCCAUGUGGA 10nt

Strand 2: Chain A: AGAGGG 6nt

Strand 3: Chain A: UCCAAAGGG 9nt

Strand 4: Chain A: CCCGCU 6nt

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