RNAJunction Database - Junction Profile:4224
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4224: 1NTA_j2_A-C15_B-A105

Primary Citation: (from PDB entry 1NTA)

V.TERESHKO E.SKRIPKIN D.J.PATEL ENCAPSULATING STREPTOMYCIN WITHIN A SMALL 40-MER RNA CHEM.BIOL. V. 10 175 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1NTB j2 A-C15 B-A105 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 42°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.25838Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GACUUCUGC 9nt

Strand 2: Chain B: GCACCACGGUC 11nt

Valid XHTML 1.0 Transitional