RNAJunction Database - Junction Profile:4
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4: 1A9L_j2_A-C10_A-C25

Primary Citation: (from PDB entry 1A9L)

J.L.DIENER P.B.MOORE SOLUTION STRUCTURE OF A SUBSTRATE FOR THE ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES: THE BULGE-HELIX-BULGE MOTIF

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1U3K j2 A-C10 A-C25 
NC-IUBMB Classification:2HS3Cluster Page
Angles: 52°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.99157Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UCCAGAGGU 9nt

Strand 2: Chain A: ACCGGA 6nt

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