RNAJunction Database - Junction Profile:3935
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3935: 1NJO_j2_0-C2435_0-G2469

Primary Citation: (from PDB entry 1NJO)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1NJN j2 0-C2435 0-G2469 
NC-IUBMB Classification:HS3HS4Cluster Page
Angles: 164°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.16619Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGUUUGGC 8nt

Strand 2: Chain 0: GCUGAUC 7nt

Valid XHTML 1.0 Transitional