RNAJunction Database - Junction Profile:3621
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3621: 1NJI_j4_A-U27_A-C480_A-G503_A-A509

Primary Citation: (from PDB entry 1NJI)

J.L.HANSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1YI2 j4 0-U27 0-C480 0-G503 0-A509 
NC-IUBMB Classification:Cluster Page
Angles: 52:74:115:137:141:147°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.60126Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCUGCAAAGUAC 12nt

Strand 2: Chain A: UUGC 4nt

Strand 3: Chain A: AGGCG 5nt

Strand 4: Chain A: AAUAGAGCAU 10nt

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