RNAJunction Database - Junction Profile:3609
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3609: 1NJI_j3_A-G1160_A-U1185_A-U1205

Primary Citation: (from PDB entry 1NJI)

J.L.HANSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:3-wayCluster:1K8A j3 A-G1160 A-U1185 A-U1205 
NC-IUBMB Classification:Cluster Page
Angles: 16:148:163°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.09763Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCUCUAAGAAAAGC 14nt

Strand 2: Chain A: GGGAGG 6nt

Strand 3: Chain A: GCUUACC 7nt

Valid XHTML 1.0 Transitional