RNAJunction Database - Junction Profile:3226
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3226: 1N33_j5_A-C58_A-G107_A-A315_A-C337_A-G351

Primary Citation: (from PDB entry 1N33)

J.M.OGLE F.V.MURPHY IV M.J.TARRY V.RAMAKRISHNAN SELECTION OF TRNA BY THE RIBOSOME REQUIRES A TRANSITION FROM AN OPEN TO A CLOSED FORM CELL (CAMBRIDGE,MASS.) V. 111 721 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1IBM j5 A-C58 A-G107 A-A315 A-C337 A-G351 
NC-IUBMB Classification:Cluster Page
Angles: 38:66:72:80:107:109:117:117:127:171°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.76053Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGGACGGGU 10nt

Strand 2: Chain A: UGCAAGU 7nt

Strand 3: Chain A: ACAGGG 6nt

Strand 4: Chain A: CCCACU 6nt

Strand 5: Chain A: AGGCAGCA 8nt

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