RNAJunction Database - Junction Profile:2953
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2953: 1M5V_j4_D-C7_E-C13_E-U68_E-U84

Primary Citation: (from PDB entry 1M5V)

P.B.RUPERT A.P.MASSEY S.T.SIGURDSSON A.R.FERRE-D'AMARE TRANSITION STATE STABILIZATION BY A CATALYTIC RNA SCIENCE V. 298 1421 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:4-wayCluster:1M5P j4 A-C7 B-C13 B-U68 B-U84 
NC-IUBMB Classification:Cluster Page
Angles: 37:38:138:148:171:175°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.59627Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain D: ACCUGAC 7nt

Strand 2: Chain E: CGUGGU 6nt

Strand 3: Chain E: GUCAACC 7nt

Strand 4: Chain E: GGUACG 6nt

Valid XHTML 1.0 Transitional