RNAJunction Database - Junction Profile:2667
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2667: 1KQS_j2_0-C1456_0-G1484

Primary Citation: (from PDB entry 1KQS)

T.M.SCHMEING A.C.SEILA J.L.HANSEN B.FREEBORN J.K.SOUKUP S.A.SCARINGE S.A.STROBEL P.B.MOORE T.A.STEITZ A PRE-TRANSLOCATIONAL INTERMEDIATE IN PROTEIN SYNTHESIS OBSERVED IN CRYSTALS OF ENZYMATICALLY ACTIVE 50S SUBUNITS NAT.STRUCT.BIOL. V. 9 225 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1YI2 j2 0-C1456 0-G1484 
NC-IUBMB Classification:HS2HS4Cluster Page
Angles: 157°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.94456Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: ACGAAAUGGG 10nt

Strand 2: Chain 0: UCCUAAGU 8nt

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