RNAJunction Database - Junction Profile:2641
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2641: 1KD1_j5_A-G641_A-C759_A-G902_A-G1300_A-G1354

Primary Citation: (from PDB entry 1KD1)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.A.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1JJ2 j5 0-G641 0-C759 0-G902 0-G1300 0-G1354 
NC-IUBMB Classification:Cluster Page
Angles: 66:66:86:95:98:104:113:121:150:162°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.65814Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACGACC 6nt

Strand 2: Chain A: GGGAGUGU 8nt

Strand 3: Chain A: GGUUCC 6nt

Strand 4: Chain A: GGCG 4nt

Strand 5: Chain A: CGAAAAUCC 9nt

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