RNAJunction Database - Junction Profile:2601
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2601: 1KD1_j2_A-U548_A-A602

Primary Citation: (from PDB entry 1KD1)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.A.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1M1K j2 A-U548 A-A602 
NC-IUBMB Classification:HS5HS6Cluster Page
Angles: 49°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.6402Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CAUACAAGGUCC 12nt

Strand 2: Chain A: GGAAGCCGAUG 11nt

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