RNAJunction Database - Junction Profile:2581
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2581: 1KD1_j2_A-G952_A-A1013

Primary Citation: (from PDB entry 1KD1)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.A.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1N8R j2 A-G952 A-A1013 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 148°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.76941Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GAGGUAG 7nt

Strand 2: Chain A: CAAACUU 7nt

Valid XHTML 1.0 Transitional