RNAJunction Database - Junction Profile:2505
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2505: 1KC8_j3_A-G1416_A-G1444_A-G1676

Primary Citation: (from PDB entry 1KC8)

J.L.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1JJ2 j3 0-G1416 0-G1444 0-G1676 
NC-IUBMB Classification:Cluster Page
Angles: 72:81:149°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.75269Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AGGGUUAGCCGG 12nt

Strand 2: Chain A: AGGGUUCCU 9nt

Strand 3: Chain A: CCGUACCG 8nt

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