RNAJunction Database - Junction Profile:2499
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2499: 1KC8_j3_A-C2329_A-G2352_A-C2366

Primary Citation: (from PDB entry 1KC8)

J.L.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:3-wayCluster:1YIJ j3 0-C2329 0-G2352 0-C2366 
NC-IUBMB Classification:Cluster Page
Angles: 36:71:85°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.50089Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGAAGAGU 8nt

Strand 2: Chain A: UCUCAG 6nt

Strand 3: Chain A: GCAAAAGA 8nt

Valid XHTML 1.0 Transitional