RNAJunction Database - Junction Profile:2485
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2485: 1KC8_j2_A-U548_A-A602

Primary Citation: (from PDB entry 1KC8)

J.L.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1M1K j2 A-U548 A-A602 
NC-IUBMB Classification:HS5HS6Cluster Page
Angles: 48°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.6313Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CAUACAAGGUCC 12nt

Strand 2: Chain A: GGAAGCCGAUG 11nt

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