RNAJunction Database - Junction Profile:2401
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2401: 1K9M_j4_A-U27_A-G448_A-A476_A-G503

Primary Citation: (from PDB entry 1K9M)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.A.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1VQL j4 0-U27 0-G448 0-A476 0-G503 
NC-IUBMB Classification:Cluster Page
Angles: 8:76:77:79:84:136°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.63355Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GAGACCGAUAGUGAACAAGUAG 22nt

Strand 2: Chain A: AUUGCUCGGCUC 12nt

Strand 3: Chain A: CGAACGCUGCAAAGUACC 18nt

Strand 4: Chain A: GAGGCGAAAUAGAGCAUG 18nt

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