RNAJunction Database - Junction Profile:2192
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2192: 1K8A_j2_A-C1854_A-U1871

Primary Citation: (from PDB entry 1K8A)

J.L.HANSEN J.A.IPPOLITO N.BAN P.NISSEN P.B.MOORE T.STEITZ THE STRUCTURES OF FOUR MACROLIDE ANTIBIOTICS BOUND TO THE LARGE RIBOSOMAL SUBUNIT MOL. CELL V. 10 117 2002

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VQL j2 0-C1854 0-U1871 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 69°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.76652Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACUCGUACGGU 11nt

Strand 2: Chain A: ACCGCAAAU 9nt

Valid XHTML 1.0 Transitional