RNAJunction Database - Junction Profile:2007
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2007: 1K01_j2_A-U1048_A-C1127

Primary Citation: (from PDB entry 1K01)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1JZZ j2 A-U1048 A-C1127 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 163°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.20356Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUCGU 5nt

Strand 2: Chain A: ACGAU 5nt

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