RNAJunction Database - Junction Profile:1963
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1963: 1K01_j2_A-C2489_A-C2554

Primary Citation: (from PDB entry 1K01)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2J01 j2 A-C2510 A-C2575 
NC-IUBMB Classification:2HS2Cluster Page
Angles: 167°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.72819Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGAGC 6nt

Strand 2: Chain A: GCUC 4nt

Valid XHTML 1.0 Transitional