RNAJunction Database - Junction Profile:1514
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1514: 1J5E_j5_A-C569_A-C651_A-G752_A-C811_A-C879

Primary Citation: (from PDB entry 1J5E)

B.T.WIMBERLY D.E.BRODERSEN W.M.CLEMONS JR. R.MORGAN-WARREN A.P.CARTER C.VONRHEIN T.HARTSCH V.RAMAKRISHNAN STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT NATURE V. 407 327 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1HNW j5 A-C569 A-C651 A-G752 A-C811 A-C879 
NC-IUBMB Classification:Cluster Page
Angles: 21:54:70:85:94:107:126:146:149:173°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.69728Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGCUAGAC 8nt

Strand 2: Chain A: GGCGUAAAGGGCGUGUAGGCGGCC 24nt

Strand 3: Chain A: GUGACGCUGAGGCGCGAAAGC 21nt

Strand 4: Chain A: GCCCUAAACGAUGCG 15nt

Strand 5: Chain A: CGCCGCC 7nt

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