RNAJunction Database - Junction Profile:1380
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1380: 1J5A_j2_A-C1221_A-G1249

Primary Citation: (from PDB entry 1J5A)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1JZY j2 A-C1221 A-G1249 
NC-IUBMB Classification:HS1HS4Cluster Page
Angles: 26°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.41261Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGCGGAGAAG 10nt

Strand 2: Chain A: UGGAGCC 7nt

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