RNAJunction Database - Junction Profile:1372
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1372: 1J5A_j2_A-A1004_A-U1170

Primary Citation: (from PDB entry 1J5A)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1JZX j2 A-A1004 A-U1170 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 158°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.0735Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCAUCAGC 8nt

Strand 2: Chain A: GCUAUGGA 8nt

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