RNAJunction Database - Junction Profile:1261
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1261: 1IBL_j2_A-G515_A-G529

Primary Citation: (from PDB entry 1IBL)

J.M.OGLE D.E.BRODERSEN W.M.CLEMONS JR. M.J.TARRY A.P.CARTER V.RAMAKRISHNAN RECOGNITION OF COGNATE TRANSFER RNA BY THE 30S RIBOSOMAL SUBUNIT SCIENCE V. 292 897 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2I2U j2 A-G515 A-G529 
NC-IUBMB Classification:HS4HS6Cluster Page
Angles: 42°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.3258Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGGUAAUACGG 12nt

Strand 2: Chain A: CCGUGCCAGC 10nt

Valid XHTML 1.0 Transitional