RNAJunction Database - Junction Profile:12458
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12458: 2OTJ_j5_0-G641_0-C759_0-G902_0-G1300_0-G1354

Primary Citation: (from PDB entry 2OTJ)

G.BLAHA S.J.SCHROEDER J.TIRADO-RIVES THE STRUCTURES OF ANTIBIOTICS BOUND TO THE E SITE REGION OF THE 50 S RIBOSOMAL SUBUNIT OF HALOARCULA MARISMORTUI: 13-DEOXYTEDANOLIDE AND GIRODAZOLE. J.MOL.BIOL. V. 367 1471 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1JJ2 j5 0-G641 0-C759 0-G902 0-G1300 0-G1354 
NC-IUBMB Classification:Cluster Page
Angles: 64:69:88:93:99:103:114:120:153:160°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.61512Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: ACGACC 6nt

Strand 2: Chain 0: GGGAGUGU 8nt

Strand 3: Chain 0: GGUUCC 6nt

Strand 4: Chain 0: GGCG 4nt

Strand 5: Chain 0: CGAAAAUCC 9nt

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