RNAJunction Database - Junction Profile:1228
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1228: 1IBK_j4_A-C1116_A-G1155_A-A1176_A-G1181

Primary Citation: (from PDB entry 1IBK)

J.M.OGLE D.E.BRODERSEN W.M.CLEMONS JR. M.J.TARRY A.P.CARTER V.RAMAKRISHNAN RECOGNITION OF COGNATE TRANSFER RNA BY THE 30S RIBOSOMAL SUBUNIT SCIENCE V. 292 897 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1FJG j4 A-C1116 A-G1155 A-A1176 A-G1181 
NC-IUBMB Classification:Cluster Page
Angles: 22:62:138:143:145:152°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.94976Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGGACUGC 8nt

Strand 2: Chain A: CCGCC 5nt

Strand 3: Chain A: GAGG 4nt

Strand 4: Chain A: AGGAGG 6nt

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