RNAJunction Database - Junction Profile:12178

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12178: 2J28_j2_B-G2848_B-U2866

Primary Citation: (from PDB entry 2J28)

M.HALIC M.BLAU T.BECKER T.MIELKE M.R.POOL K.WILD I.SINNING R.BECKMANN JRNL REMARK DBREF FOLLOWING THE SIGNAL SEQUENCE FROM RIBOSOMAL TUNNEL EXIT TO SIGNAL RECOGNITION PARTICLE NATURE V. 444 508 2006

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2AW4 j2 B-G2848 B-U2866 
NC-IUBMB Classification:HS1HS2Cluster Page
Angles: 115°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.74269Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: GUGUAAGC 8nt

Strand 2: Chain B: GUUGAGC 7nt

Valid XHTML 1.0 Transitional