RNAJunction Database - Junction Profile:11592
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11592: 2I2P_j5_A-C569_A-C651_A-G752_A-C811_A-C879

Primary Citation: (from PDB entry 2I2P)

V.BERK W.ZHANG R.D.PAI J.H.D.CATE STRUCTURAL BASIS FOR MRNA AND TRNA POSITIONING ON THE RIBOSOME. PROC.NATL.ACAD.SCI.USA V. 103 15830 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:2I2U j5 A-C569 A-C651 A-G752 A-C811 A-C879 
NC-IUBMB Classification:Cluster Page
Angles: 23:54:66:86:94:113:124:145:151:174°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.72163Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AGCUUGAG 8nt

Strand 2: Chain A: GGCGUAAAGCGCACGCAGGCGGUU 24nt

Strand 3: Chain A: CUGACGCUCAGGUGCGAAAGC 21nt

Strand 4: Chain A: GCCGUAAACGAUGUC 15nt

Strand 5: Chain A: GACCGCC 7nt

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