RNAJunction Database - Junction Profile:11584
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11584: 2I2P_j4_A-G115_A-U239_A-A274_A-C311

Primary Citation: (from PDB entry 2I2P)

V.BERK W.ZHANG R.D.PAI J.H.D.CATE STRUCTURAL BASIS FOR MRNA AND TRNA POSITIONING ON THE RIBOSOME. PROC.NATL.ACAD.SCI.USA V. 103 15830 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2I2U j4 A-G115 A-U239 A-A274 A-C311 
NC-IUBMB Classification:Cluster Page
Angles: 18:67:70:102:106:171°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.76742Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GAUGGGAUUAGCUAGUAG 18nt

Strand 2: Chain A: GUGAGUAAUGUC 12nt

Strand 3: Chain A: CUAGGCGACGAUCCCUAGCU 20nt

Strand 4: Chain A: AGCCAC 6nt

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