RNAJunction

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11481: 2HHH_j4_A-G109_A-U235_A-A270_A-C307

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images

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Derived Information

Type:	4-way	Cluster:	1HNW j4 A-G115 A-U239 A-A274 A-C311
NC-IUBMB Classification:			Cluster Page
Angles:	16:63:72:99:108:171°
Fit Criteria:	A
Extracted Structure:	Download
Minimized Structure:	Download RMSD = 0.71224Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGUCCCAUCAGCUAGUUG 18nt

Strand 2: Chain A: GUGAGUAACGCG 12nt

Strand 3: Chain A: CAAGGCGACGACGGGUAGCC 20nt

Strand 4: Chain A: GGCCAC 6nt