RNAJunction Database - Junction Profile:11441
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11441: 2HHH_j2_A-G1110_A-G1127

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1J5E j2 A-G1127 A-G1144 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 136°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.54552Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGCCAG 6nt

Strand 2: Chain A: GGCACU 6nt

Valid XHTML 1.0 Transitional