RNAJunction Database - Junction Profile:11439
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11439: 2HHH_j2_A-G1107_A-G1127

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1HNW j2 A-G1124 A-G1144 
NC-IUBMB Classification:HS4HS5Cluster Page
Angles: 133°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.40772Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UAGUUGCCAGC 11nt

Strand 2: Chain A: GGGCACUCUA 10nt

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