RNAJunction Database - Junction Profile:1100
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1100: 1I97_j2_A-C1385_A-G1468

Primary Citation: (from PDB entry 1I97)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1I94 j2 A-C1385 A-G1468 
NC-IUBMB Classification:HS5HS7Cluster Page
Angles: 138°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.14069Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGAAGUCGUAAC 13nt

Strand 2: Chain A: GCCCGUCACGC 11nt

Valid XHTML 1.0 Transitional