RNAJunction Database - Junction Profile:1046

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1046: 1I96_j2_A-G578_A-A623

Primary Citation: (from PDB entry 1I96)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1HNW j2 A-G595 A-A640 
NC-IUBMB Classification:HS2HS3Cluster Page
Angles: 146°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.73583Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGAUACGCU 9nt

Strand 2: Chain A: GGGCGUCC 8nt

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