RNAJunction Database - Junction Profile:10455
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10455: 2E5L_j2_A-G1124_A-G1144

Primary Citation: (from PDB entry 2E5L)

T.KAMINISHI D.N.WILSON C.TAKEMOTO J.M.HARMS M.KAWAZOE F.SCHLUENZEN K.HANAWA-SUETSUGU M.SHIROUZU P.FUCINI S.YOKOYAMA RIKEN STRUCTURAL GENOMICS/PROTEO A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE-DALGARNO INTERACTION STRUCTURE V. 15 289 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1HNW j2 A-G1124 A-G1144 
NC-IUBMB Classification:HS4HS5Cluster Page
Angles: 132°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.58133Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UAGUUGCCAGC 11nt

Strand 2: Chain A: GGGCACUCUA 10nt

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