RNAJunction Database - Junction Profile:1045
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1045: 1I96_j2_A-G498_A-G512

Primary Citation: (from PDB entry 1I96)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2I2U j2 A-G515 A-G529 
NC-IUBMB Classification:HS4HS6Cluster Page
Angles: 45°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.10524Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGGUAAUACGG 12nt

Strand 2: Chain A: CCGUGCCAGC 10nt

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