RNAJunction Database - Junction Profile:10441
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10441: 2E5L_j2_A-C1249_A-A1285

Primary Citation: (from PDB entry 2E5L)

T.KAMINISHI D.N.WILSON C.TAKEMOTO J.M.HARMS M.KAWAZOE F.SCHLUENZEN K.HANAWA-SUETSUGU M.SHIROUZU P.FUCINI S.YOKOYAMA RIKEN STRUCTURAL GENOMICS/PROTEO A SNAPSHOT OF THE 30S RIBOSOMAL SUBUNIT CAPTURING MRNA VIA THE SHINE-DALGARNO INTERACTION STRUCTURE V. 15 289 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1HNZ j2 A-C1249 A-A1285 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 157°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.06469Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UACAAAGC 8nt

Strand 2: Chain A: GCAAAAAG 8nt

Valid XHTML 1.0 Transitional